Linuxserver updated their Syncthing recently, and this morning Watchtower installed it on my Synology. It looks like this new version requires a database migration⦠and that has been running on my system for several hours. However, in the logs, which seem to be updating around every 15 minutes, it shows a lot of errors:
2025/09/02 08:36:09 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 08:36:08 stdout 2025-09-02 08:36:08 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 08:36:03 stdout 2025-09-02 08:36:03 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 08:36:02 stdout 2025-09-02 08:36:02 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): out of memory (7)" log.pkg=main)
2025/09/02 08:26:13 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 08:26:12 stdout 2025-09-02 08:26:12 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 08:26:07 stdout 2025-09-02 08:26:07 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 08:26:06 stdout 2025-09-02 08:26:06 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): out of memory (7)" log.pkg=main)
2025/09/02 08:13:59 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 08:13:58 stdout 2025-09-02 08:13:58 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 08:13:53 stdout 2025-09-02 08:13:53 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 08:13:52 stdout 2025-09-02 08:13:52 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 07:56:01 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 07:56:00 stdout 2025-09-02 07:56:00 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 07:55:55 stdout 2025-09-02 07:55:55 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 07:55:54 stdout 2025-09-02 07:55:54 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 07:41:57 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 07:41:56 stdout 2025-09-02 07:41:56 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 07:41:51 stdout 2025-09-02 07:41:51 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 07:41:51 stdout 2025-09-02 07:41:51 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): out of memory (7)" log.pkg=main)
2025/09/02 07:30:10 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 07:30:09 stdout 2025-09-02 07:30:09 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 07:30:04 stdout 2025-09-02 07:30:04 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 07:30:02 stdout 2025-09-02 07:30:02 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 07:14:46 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 07:14:45 stdout 2025-09-02 07:14:45 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 07:14:40 stdout 2025-09-02 07:14:40 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 07:14:39 stdout 2025-09-02 07:14:39 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): out of memory (7)" log.pkg=main)
2025/09/02 07:03:23 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 07:03:22 stdout 2025-09-02 07:03:22 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 07:03:17 stdout 2025-09-02 07:03:17 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 07:03:14 stdout 2025-09-02 07:03:14 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 06:46:30 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 06:46:29 stdout 2025-09-02 06:46:29 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 06:46:24 stdout 2025-09-02 06:46:24 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 06:46:23 stdout 2025-09-02 06:46:23 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 06:28:53 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 06:28:52 stdout 2025-09-02 06:28:52 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 06:28:47 stdout 2025-09-02 06:28:47 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 06:28:45 stdout 2025-09-02 06:28:45 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 06:11:28 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 06:11:27 stdout 2025-09-02 06:11:27 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 06:11:22 stdout 2025-09-02 06:11:22 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 06:11:19 stdout 2025-09-02 06:11:19 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 05:54:55 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 05:54:54 stdout 2025-09-02 05:54:54 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 05:54:49 stdout 2025-09-02 05:54:49 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 05:54:48 stdout 2025-09-02 05:54:48 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 05:39:18 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 05:39:17 stdout 2025-09-02 05:39:17 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 05:39:12 stdout 2025-09-02 05:39:12 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 05:39:11 stdout 2025-09-02 05:39:11 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 05:22:57 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 05:22:56 stdout 2025-09-02 05:22:56 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 05:22:51 stdout 2025-09-02 05:22:51 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 05:22:50 stdout 2025-09-02 05:22:50 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 05:03:11 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 05:03:10 stdout 2025-09-02 05:03:10 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 05:03:05 stdout 2025-09-02 05:03:05 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 05:03:02 stdout 2025-09-02 05:03:02 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 04:50:02 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 04:50:01 stdout 2025-09-02 04:50:01 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 04:49:56 stdout 2025-09-02 04:49:56 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 04:49:55 stdout 2025-09-02 04:49:55 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): out of memory (7)" log.pkg=main)
2025/09/02 04:38:56 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 04:38:55 stdout 2025-09-02 04:38:55 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 04:38:50 stdout 2025-09-02 04:38:50 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 04:38:49 stdout 2025-09-02 04:38:49 ERR Error opening database (error="open: startfolderdatabases: getfolderdb: openbase: vacuumandoptimize (VACUUM;): disk I/O error (5386)" log.pkg=main)
2025/09/02 04:11:25 stdout [ls.io-init] done.
2025/09/02 04:11:25 stderr Connection to localhost (127.0.0.1) 8384 port [tcp/*] succeeded!
2025/09/02 04:11:24 stdout 2025-09-02 04:11:24 INF Starting temporary GUI/API during migration (address=0.0.0.0:8384 log.pkg=main)
2025/09/02 04:11:20 stdout 2025-09-02 04:11:20 INF Applying database migration (path=folder.0001-saxr6ven.db script=04-alter-blocks-tables.sql log.pkg=db/sqlite)
2025/09/02 04:11:19 stdout 2025-09-02 04:11:19 INF syncthing v2.0.4 "Hafnium Hornet" (go1.24.6 linux-amd64) root@buildkitsandbox 2025-09-02 06:17:46 UTC [modernc-sqlite, noupgrade] (log.pkg=main)
2025/09/02 04:11:19 stdout [custom-init] No custom files found, skipping...
2025/09/02 04:11:19 stdout
2025/09/02 04:11:19 stdout βββββββββββββββββββββββββββββββββββββββ
2025/09/02 04:11:19 stdout Build-date: 2025-09-02T06:15:45+00:00
2025/09/02 04:11:19 stdout Linuxserver.io version: v2.0.4-ls194
2025/09/02 04:11:19 stdout βββββββββββββββββββββββββββββββββββββββ
2025/09/02 04:11:19 stdout User GID: 100
2025/09/02 04:11:19 stdout User UID: 1031
2025/09/02 04:11:19 stdout
2025/09/02 04:11:19 stdout βββββββββββββββββββββββββββββββββββββββ
2025/09/02 04:11:19 stdout GID/UID
2025/09/02 04:11:19 stdout βββββββββββββββββββββββββββββββββββββββ
2025/09/02 04:11:19 stdout
2025/09/02 04:11:19 stdout https://www.linuxserver.io/donate/
2025/09/02 04:11:19 stdout To support LSIO projects visit:
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2025/09/02 04:11:19 stdout Brought to you by linuxserver.io
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2025/09/02 04:11:19 stdout βββββββββββββββββββ βββββββ
2025/09/02 04:11:19 stdout ββββββββββββββββββββββββββββ
2025/09/02 04:11:19 stdout βββ ββββββββββββββ βββ
2025/09/02 04:11:19 stdout βββ ββββββββββββββ βββ
2025/09/02 04:11:19 stdout βββ ββββββββββββββββββββ
2025/09/02 04:11:19 stdout βββ βββββββββββ βββββββ
2025/09/02 04:11:19 stdout
2025/09/02 04:11:19 stdout βββββββββββββββββββββββββββββββββββββββ
2025/09/02 04:11:18 stdout [migrations] no migrations found
2025/09/02 04:11:18 stdout [migrations] started
Should I be worried? I donβt see any progress information on the migration, so I donβt know if itβs continuing through the errors.